CDS

Accession Number TCMCG066C10913
gbkey CDS
Protein Id XP_034583922.1
Location join(8024143..8024331,8024431..8024621,8024957..8025073,8025225..8025344,8027198..8027879,8027984..8028396,8029831..8029906)
Gene LOC117846908
GeneID 117846908
Organism Setaria viridis

Protein

Length 595aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034728031.1
Definition probable rhamnogalacturonate lyase B isoform X2 [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category S
Description Polysaccharide lyase family 4, domain III
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K18195        [VIEW IN KEGG]
EC 4.2.2.23        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGGAGCTAGTATATTCATCGTGGTCTCGTGGACCATGGCACCATCCATGGTGGTCTCGTGGACCATGGCCGCCGCTCCGAGGTGGTGCCTCAAGCTCGCCGTGGGAGCGTCCATGCTGGTGCTGCTCGTCGCCGCCGCCCCGCCGCAAGCAGCCGGTGGCGTCACCTTACGCGTCGACCCTGGCCAGGTAGTTGTAGACAATGGCGTGGTGCAGGTGTCGCTGTCGAGGCCGCAGGGCCAGATCACCGGCATCCGCTACGGCGGCGGCGGCGACCAAAACCTGCTGGAGTACAACGCCAGCCAGGGGAACTCGGGAGGGTACTGGGATGTGGTCTGGAACTACCCTGGCTCGGATCACCCAGGAGGAACGATGGATATTTTGGACGGTACAGAGTTCCAGGTCGTATCCTCAAGTGAGGAGCAAGTGGAGCTTTCCTTCAGGAGCTCATACAACGCGTCGCGTCCAAACAGCGTACGGCTAAACGTCGACAAGAGGCTTGTGATGCTGAGAGACAGCTCCGGGTTCTACTGCTACGCCATCTTCGAGCACGCCCGGGAGCACCCAGCTCTCAACATCTCCGTGGCTCGCCTCGCTTTCAAACTAAACGCCGCCAAGTTCAACTACATGGCGATCTCGGACGGCATCCAGAGGTACATGCCGAGCGCGGCGGACAGGGACCCACCCCGCGGCGTCCCGCTGGCGTACAAGGAGGCCGTCCTGCTGGTGGACCCCGTGGAGCCGGAGTTCAGAGGGGAGGTGGACGACAAGTACCAGTACTCCATGGACAACGAGGACAACACGGTGCACGGGTGGATCGCCGGCAGCAACGACGACGACCCGGCGGCGGCGACGGGCTTCTGGGTCGTCACTCCCAGCAACGAGTTCAAGAACGGCGGGCCGCTCAAGCGGGAGCTCACCTCCCACGTTGGCCCCACCTCCCTCTCGGTGTTTCTGGGGCCGCATTACGTCGGCAGGGACATGGTGATCGAGTTCGAGGAGGGCGAGTACTGGAAGAAGGTGCTGGGCCCCGTCTTCATCTACCTGAACTCCGGCCGCCCGGACTCCAAGAGAGGCCTCTGGGAGGACGCCAAGGCGCGGGCGCAAGCGGAGGTGAGGAAATGGCCCTACGACTTCCCCCGGTCGCCGGACTTCGCAAAGGCAGGCGAGAGAGGCTCCGTCACGGGGAGGCTCTGGGTCAGAGACGGCGTCGCCAACAAGCAGCAGCAGCCGGCTGCGATGGCCTACGTCGGGCTCGCCGCGCCTGGCCAACCTGCCTCCTGGGCCACGGAGAGCAAGAGGTACCAGTTCTGGACGAGGGCCGCCTCCGACGGCAGCTTCAGCATCGGCGACGTCCGGGAAGGGGTGTACAACCTGTACGCCTGGGTCCCCGGGATCCTTGGTGACTACATGCACACCTTCCCCGTGACGGTAACTCCGGCGGGCGGCGTCGACGTCGGCAACCTCGTGTTCGAGCCCCCGAGGTCGGGCCCCACGCTGTGGGAGATCGGCGTCCCGGACCGGTCGGCGGCGGAGTTCTACGTCCCCGACCCCGACCCGAGGTACTCCAGCAGGCTCTTCCTGACCAAGGACAGGTACAGGCAGTACGGCCTGTGGGAGAGGTACGCCGCCCTCTACCCCGACAGCGACCTCGTGTTCACCGTCGGCGAGAGCAACCACTCCACGGACTGGTTCTTCGCGCATGTCACAAGGTCGTCGGCGGCAAGGGTGACACCACGGTGGTGCCAACGACATGGCAGATACGCTTCCACCTGGACCGCGTCGTAG
Protein:  
MGASIFIVVSWTMAPSMVVSWTMAAAPRWCLKLAVGASMLVLLVAAAPPQAAGGVTLRVDPGQVVVDNGVVQVSLSRPQGQITGIRYGGGGDQNLLEYNASQGNSGGYWDVVWNYPGSDHPGGTMDILDGTEFQVVSSSEEQVELSFRSSYNASRPNSVRLNVDKRLVMLRDSSGFYCYAIFEHAREHPALNISVARLAFKLNAAKFNYMAISDGIQRYMPSAADRDPPRGVPLAYKEAVLLVDPVEPEFRGEVDDKYQYSMDNEDNTVHGWIAGSNDDDPAAATGFWVVTPSNEFKNGGPLKRELTSHVGPTSLSVFLGPHYVGRDMVIEFEEGEYWKKVLGPVFIYLNSGRPDSKRGLWEDAKARAQAEVRKWPYDFPRSPDFAKAGERGSVTGRLWVRDGVANKQQQPAAMAYVGLAAPGQPASWATESKRYQFWTRAASDGSFSIGDVREGVYNLYAWVPGILGDYMHTFPVTVTPAGGVDVGNLVFEPPRSGPTLWEIGVPDRSAAEFYVPDPDPRYSSRLFLTKDRYRQYGLWERYAALYPDSDLVFTVGESNHSTDWFFAHVTRSSAARVTPRWCQRHGRYASTWTAS